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An ontology for immune epitopes: application to the design of a broad scope database of immune reactivities

Muthuraman Sathiamurthy1 email, Bjoern Peters1 email, Huynh-Hoa Bui1 email, John Sidney1 email, John Mokili1 email, Stephen S Wilson1 email, Ward Fleri1 email, Deborah L McGuinness2 email, Philip E Bourne3 email and Alessandro Sette1 email

1La Jolla Institute of Allergy and Immunology, 3030 Bunker Hill Street, Suite 326, San Diego, California, 92109, USA

2Knowledge Systems, Artificial Intelligence Laboratory, Stanford University and McGuinness Associates, Stanford, CA 94305, USA

3San Diego Supercomputer Center, P.O. Box 85608, San Diego, California 92186-5608, USA

author email corresponding author email

Immunome Research 2005, 1:2doi:10.1186/1745-7580-1-2

Published: 20 September 2005

Additional files

Additional File 1:

Sample Curation. This file contains a table that shows how epitope and its related information were extracted from a literature reference and mapped into the IEDB ontology.

Format: PDF Size: 397KB Download file

This file can be viewed with: Adobe Acrobat Reader

Additional File 2:

IEDB Data Dictionary v12-5. The Data Dictionary contains the textual overview description and a listing of fields that are captured for IEDB.

Format: PDF Size: 486KB Download file

This file can be viewed with: Adobe Acrobat Reader


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