An ontology for immune epitopes: application to the design of a broad scope database of immune reactivities

doi:10.1186/1745-7580-1-2

Immunome Research

Volume 1

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Sathiamurthy M
Peters B
Bui HH
Sidney J
Mokili J
Wilson SS
Fleri W
McGuinness DL
Bourne PE
Sette A

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Sathiamurthy M
Peters B
Bui HH
Sidney J
Mokili J
Wilson SS
Fleri W
McGuinness DL
Bourne PE
Sette A
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An ontology for immune epitopes: application to the design of a broad scope database of immune reactivities

Muthuraman Sathiamurthy¹ , Bjoern Peters¹ , Huynh-Hoa Bui¹ , John Sidney¹ , John Mokili¹ , Stephen S Wilson¹ , Ward Fleri¹ , Deborah L McGuinness² , Philip E Bourne³ and Alessandro Sette¹

¹La Jolla Institute of Allergy and Immunology, 3030 Bunker Hill Street, Suite 326, San Diego, California, 92109, USA

²Knowledge Systems, Artificial Intelligence Laboratory, Stanford University and McGuinness Associates, Stanford, CA 94305, USA

³San Diego Supercomputer Center, P.O. Box 85608, San Diego, California 92186-5608, USA

author email corresponding author email

Immunome Research 2005, 1:2doi:10.1186/1745-7580-1-2


Published:	20 September 2005

Additional files

Additional File 1:

Sample Curation. This file contains a table that shows how epitope and its related information were extracted from a literature reference and mapped into the IEDB ontology.

Format: PDF Size: 397KB Download file

This file can be viewed with: Adobe Acrobat Reader

Additional File 2:

IEDB Data Dictionary v12-5. The Data Dictionary contains the textual overview description and a listing of fields that are captured for IEDB.

Format: PDF Size: 486KB Download file

This file can be viewed with: Adobe Acrobat Reader