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Predicted Cw*0401-specific immunological hotspots for gp160gag. |
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| No. |
Position |
Sequence |
|
|
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| 1 |
44–89 |
VWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVVLVNV |
| 2 |
102–171 |
EQMHEDIISLWDQSLKPCVKLTPLCVSLKCTDLGNATNTNSSNTNSSSGEMM MEKGEIKNCSFNISTSIR |
| 3 |
174–289 |
VQKEYAFFYKLDIIPIDNDTTSYTLTSCNTSVITQACPKVSFEPIPIHYCAP AGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVI RSANFTDNAKTI |
| 4 |
341–504 |
AKWNATLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHSFNCGGEFFYCNS TQLFNSTWFNSTWSTEGSNNTEGSDTITLPCRIKQFINMWQEVGKAMYAPPI SGQIRCSSNITGLLLTRDGGNNNNGSEIFRPGGGDMRDNWRSELYKYKVVKI EPLGVAPT |
| 5 |
489–559 |
KYKVVKIEPLGVAPTKAKRRVVQREKRAVGIGALFLGFLGAAGSTMGARSMT LTVQARQLLSGIVQQQNN |
| 6 |
581–639 |
LQARILAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLEQIWNNMT WMEWDRE |
| 7 |
667–721 |
ELDKWASLWNWFNITNWLWYIKIFIMIVGGLVGLRIVFAVLSIVNRVRQGYS PLS |
| 8 |
708–766 |
SIVNRVRQGYSPLSFQTHLPTPRGPDRPEGIEEEGGERDRDRSIRLVNGSLA LIWDDLR |
| 9 |
793–852 |
RGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRVIEVVQGACRA IRHIPRRI |
Tong et al. Immunome Research 2007 3:7 doi:10.1186/1745-7580-3-7 |
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